Dr. Neher studies a range of viral infections, including avian influenza and COVID-19, as well as cancer-related conditions like advanced prostate cancer. He works on developing tools to rapidly identify viral strains and inform public health measures, ensuring effective monitoring and response to outbreaks. Additionally, his research includes examining how specific drugs, such as enzalutamide, can enhance treatment effectiveness for prostate cancer by examining tumor markers. His studies also delve into how genetic sequencing can help tailor responses to diseases like HIV and echovirus 30 infections.
Key findings
Developed Nextclade, achieving a clade assignment accuracy of 97.8% with nearly 20,000 avian influenza A(H5) virus samples.
In a study of SARS-CoV-2 in Switzerland, found that reducing genomic sequencing to 35% retained the ability to detect new variants, though it could impact accuracy.
Found that enzalutamide increased prostate-specific membrane antigen (PSMA) levels by over 10% in tumors of 30 men with advanced prostate cancer.
Identified that echovirus 30 primarily infected young children (29%) and young adults (27%), with 76% of samples belonging to two main genetic groups across 22 countries.
Developed a malaria detection test using saliva, successfully identifying the malaria-causing parasite in all 35 patients tested.
Frequently asked questions
Does Dr. Neher study avian influenza?
Yes, he focuses on avian influenza A(H5) and has developed tools to identify different strains effectively.
What treatments has Dr. Neher researched for prostate cancer?
He has researched the effects of enzalutamide on prostate-specific membrane antigen (PSMA) levels in patients with advanced prostate cancer.
Is Dr. Neher's research relevant for COVID-19?
Yes, he has studied the COVID-19 epidemic in Switzerland, emphasizing the importance of testing and contact tracing.
What insights does Dr. Neher provide about bacterial infections?
He has researched antibiotic resistance in bacteria like E. coli and Pseudomonas aeruginosa, helping doctors understand treatment complexities.
Can Dr. Neher's work help patients in rural areas?
Yes, his malaria detection method using saliva provides a quick and accessible way for diagnosing malaria in remote settings.
Publications in plain English
Development of avian influenza A(H5) virus datasets for Nextclade enables rapid and accurate clade assignment.
2025
bioRxiv : the preprint server for biology
Ort JT, Zolnoski SA, Lam TT, Neher R, Moncla LH
Plain English Researchers developed a new tool called Nextclade to quickly and accurately identify different types of avian influenza A(H5) viruses. They tested this tool using nearly 20,000 genetic samples and found it correctly assigned clades with high accuracy—97.8% for some subtypes. This is important because it helps public health labs distinguish between dangerous and less harmful strains of the virus, helping to manage outbreaks more effectively.
Who this helps: This benefits public health officials and veterinarians monitoring bird flu outbreaks.
How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort.
2024
Microbiology spectrum
Wegner F, Cabrera-Gil B, Tanguy A, Beckmann C, Beerenwinkel N +44 more
Plain English This study looked at how much genomic sequencing of the SARS-CoV-2 virus is needed in Switzerland to effectively track and respond to different variants. The researchers found that even reducing sequencing to only 35% of the original effort still allowed for the detection of important aspects of the virus's spread, such as identifying new variants and their first appearances. However, cutting back on sequencing could harm accuracy in tracking some variants, particularly Omicron and Delta.
Who this helps: This research benefits public health officials and policymakers by informing them on efficient resource allocation for pandemic surveillance.
Upregulation of PSMA Expression by Enzalutamide in Patients with Advanced mCRPC.
2022
Cancers
Rosar F, Neher R, Burgard C, Linxweiler J, Schreckenberger M +4 more
Plain English This study looked at how the drug enzalutamide affects the level of prostate-specific membrane antigen (PSMA) in 30 men with advanced prostate cancer that no longer responds to hormone therapy. After taking enzalutamide for an average of about 13 days, the PSMA levels in the tumors increased significantly—by over 10% in most cases—while prostate-specific antigen (PSA) levels stayed the same. These findings are important because they suggest that enzalutamide could make prostate cancer treatments that target PSMA more effective.
Who this helps: This benefits patients with advanced prostate cancer and their doctors.
Molecular Epidemiology and Evolutionary Trajectory of Emerging Echovirus 30, Europe.
2021
Emerging infectious diseases
Benschop KSM, Broberg EK, Hodcroft E, Schmitz D, Albert J +64 more
Plain English Researchers studied the rise of echovirus 30 (E30) infections in Europe between 2016 and 2018, analyzing 1,329 samples from 22 countries. They found that most infections occurred in very young children aged 0-4 years (29%) and young adults aged 25-34 years (27%), with the majority of the virus strains belonging to two main genetic groups (G1 at 53% and G6 at 23%). Understanding how these forms of the virus change quickly is important for tracking and managing these infections effectively.
Who this helps: This information is beneficial for doctors and public health officials working to monitor and control viral outbreaks.
COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation.
2020
Swiss medical weekly
Salathé M, Althaus CL, Neher R, Stringhini S, Hodcroft E +8 more
Plain English This study examined the COVID-19 situation in Switzerland, highlighting that the country has one of the highest rates of infection worldwide. Researchers found that many people with the virus are not being detected by current testing methods and emphasized the need for stronger testing alongside measures like contact tracing and isolation of infected individuals. This matters because without comprehensive testing and immediate follow-up actions, the spread of COVID-19 will continue.
Who this helps: This helps patients and healthcare providers in managing and controlling COVID-19 outbreaks effectively.
Quantitative contribution of efflux to multi-drug resistance of clinical Escherichia coli and Pseudomonas aeruginosa strains.
2019
EBioMedicine
Cunrath O, Meinel DM, Maturana P, Fanous J, Buyck JM +9 more
Plain English This study looked at how certain bacteria, specifically E. coli and Pseudomonas aeruginosa, resist antibiotics in real-world clinical settings. Researchers found that for 15 out of 18 E. coli strains, a specific part of their genetic machinery (called tolC) that helps them pump out antibiotics was removed, which significantly lowered their ability to resist treatment. However, these bacteria still remained resistant because they had other mechanisms to fight antibiotics, and similar changes in P. aeruginosa only affected some strains.
Who this helps: This research benefits doctors and patients dealing with bacterial infections by highlighting the complexity of antibiotic resistance.
Detection of the Malaria causing Plasmodium Parasite in Saliva from Infected Patients using Topoisomerase I Activity as a Biomarker.
2018
Scientific reports
Hede MS, Fjelstrup S, Lötsch F, Zoleko RM, Klicpera A +13 more
Plain English This research focused on finding a new way to detect malaria using saliva from infected patients. The scientists created a test that successfully identified the malaria-causing parasite in saliva from all 35 patients who were tested, using a simple color change that could be seen without special equipment. This method is important because it provides a quick and easy way to diagnose malaria, especially in rural areas where traditional testing may not be available.
Who this helps: This helps patients in remote areas by providing accessible malaria testing.
Estimating time of HIV-1 infection from next-generation sequence diversity.
2017
PLoS computational biology
Puller V, Neher R, Albert J
Plain English This study looked at how to better estimate the time since someone was infected with HIV-1 by analyzing the diversity of the virus using advanced genetic sequencing methods. Researchers found that the variation in the virus increased over time, allowing them to estimate the time since infection with an average error of about one year. This method is more precise than older techniques, especially for patients who have been infected for several years.
Who this helps: This helps doctors and healthcare providers better understand and manage HIV-1 patients based on the timing of their infections.
Optimizing imaging parameters for the separation of multiple labels in a fluorescence image.
2004
Journal of microscopy
Neher R, Neher E
Plain English This research looked at how to improve the way we capture and separate images of multiple fluorescent tags used in scientific studies. The findings revealed that by carefully selecting just a few specific channels for capturing light, researchers could achieve nearly optimal separation of these tags, even with as few as three channels. Also, the study showed that factoring in how long the fluorescent tags glow before fading significantly enhances image quality, especially when the glowing times are different.
Who this helps: This benefits researchers using fluorescence imaging in fields like biology and medicine.
Rat adrenal cycloheximide-sensitive factors and phospholipids in the control of acute steroidogenesis.
1984
Journal of steroid biochemistry
Solano AR, Neher R, Podesta EJ
Plain English This study investigated how certain factors in rat adrenal glands help produce steroids, which are important hormones. The researchers found a key component (C1) that assists in releasing another factor (C2) necessary for steroid production. Particularly, C1 boosts the effect of phospholipids by 3-4 times, indicating that both components are crucial for making steroids when stimulated by ACTH, a hormone that signals the adrenal glands to produce steroids.
Who this helps: This research benefits doctors and scientists working on hormone regulation and adrenal health.
Compartmentalization of corticotropin-dependent steroidogenic factors in adrenal cortex: evidence for a post-translational cascade in stimulation of the cholesterol side-chain split.
1982
Proceedings of the National Academy of Sciences of the United States of America
Neher R, Milani A, Solano AR, Podestà EJ
Plain English This research focused on how certain factors in the adrenal cortex are activated by a hormone called corticotropin to produce important steroid hormones. The study found that these factors could increase the production of precursors for hormones by 10 to 100 times when cells were stimulated. Understanding these processes is crucial because they play a key role in hormone production, which affects various bodily functions including stress response and metabolism.
Who this helps: This information benefits doctors and researchers studying adrenal function and hormone-related disorders.
Steroidogenic action of calcium ions in isolated adrenocortical cells.
1980
The Biochemical journal
Podesta EJ, Milani A, Steffen H, Neher R
Plain English In this study, researchers looked at how calcium ions affect hormone production in rat adrenal cells. They found that for a hormone called corticotropin to work effectively, it needs calcium ions present; specifically, higher calcium levels led to more cyclic AMP (a molecule that helps signal cells), while a decrease in available binding sites was also observed. Under special conditions, these cells could produce a hormone called corticosterone just from calcium, without needing corticotropin, showing that calcium plays a crucial role in hormone production.
Who this helps: This helps patients with adrenal insufficiency and their doctors by understanding better ways to stimulate hormone production.
Steroidogenesis in isolated adrenocortical cells. Correlation with receptor-bound adenosine e 3':5'-cyclic monophosphate.
1979
The Biochemical journal
Podesta EJ, Milani A, Steffen H, Neher R
Plain English This study focused on how certain molecules in adrenal cells contribute to the production of steroid hormones, particularly looking at cyclic AMP and its different forms. The researchers found that when low levels of corticotropin (a hormone) were present, there was an increase in cyclic AMP, which in turn was linked to higher steroid hormone production. Specifically, the amount of cyclic AMP attached to its receptors increased at this corticotropin level, aiding hormone production, highlighting its importance in the process.
Who this helps: This helps patients who rely on hormone treatments, as understanding these mechanisms can improve therapies.
Adrenocorticotropin (ACTH) induces phosphorylation of a cytoplasmic protein in intact isolated adrenocortical cells.
1979
Proceedings of the National Academy of Sciences of the United States of America
Podesta EJ, Milani A, Steffen H, Neher R
Plain English This study looked at how a hormone called adrenocorticotropin (ACTH) affects a specific protein in adrenal cells. Researchers found that when ACTH was present, the protein's activity increased rapidly, by about 300-500%, with just a small amount (3 pM) of ACTH needed to trigger this response. This is important because it helps us understand how hormones influence steroid hormone production in the body.
Who this helps: This helps patients with adrenal disorders by providing insights that could improve treatment options.
Steroidogenesis in isolated adrenal cells: excitation by calcium.
1978
Molecular and cellular endocrinology
Neher R, Milani A
Plain English This study looked at how calcium affects the production of steroids in rat adrenal cells. Researchers found that calcium can stimulate steroid production in these cells, similar to how the hormone ACTH does, especially when combined with certain chemicals. This finding matters because it could lead to new insights into how adrenal function works and how to treat disorders related to steroid production.
Who this helps: This helps patients with adrenal disorders and the doctors treating them.
Plain English Researchers studied how certain hormone peptides, like ACTH, work in cells to produce steroids without being released themselves. They found that calcium ions outside the cells are crucial for this process; when conditions are right, they trigger these cells to produce steroids effectively. Specifically, the calcium and phosphate balance in the environment affects the hormone's action, highlighting calcium's role as a key messenger in this activation process.
Who this helps: This helps patients who rely on steroid hormones for their health, as understanding this process can lead to better treatments and therapies.
THE EFFECT OF SHORT-TERM CHOLESTEROL FEEDING ON THE DEVELOPMENT OF AORTIC ATHEROMATOSIS IN THE RABBIT. 2. THE INFLUENCE OF HYPERCHOLESTEROLAEMIA ON ADRENAL FUNCTION.